App::Mimosa - Miniature Model Organism Sequence Aligner
For full details on the deploy options:
To deploy a Mimosa database:
For full details on the server options:
To start Mimosa on port 8888:
perl script/mimosa_server.pl -p 8888
To start Mimosa on the default port (3000):
You should see something like:
You can connect to your server at http://localhost:3000
Now you can go to http://localhost:3000 and try Mimosa!
Mimosa has some non-Perl dependencies. Most notably, the NCBI BLAST command-line suite of programs. These are detected by attempting to execute
If it does not exist, then Mimosa will currently not work at all. Future versions of Mimosa may detect different alignment programs such as BWA.
The above command is also necessary to run the Mimosa test suite.
Jonathan "Duke" Leto <email@example.com>, Rob Buels
This library is free software. You can redistribute it and/or modify it under the same terms as Perl itself.