Chris Mungall > Bio-Chaos

Bio-Chaos

This Release Bio-Chaos-0.02  [Download] [Browse 02 Sep 2005
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Special Files
INSTALL
Makefile.PL
META.yml
README

Modules

Bio::Chaos utility class for handling Chaos-XML     
Bio::Chaos::ChaosGraph object for representing a chaos-xml dataset     
Bio::Chaos::DB::Chado I/O from a chado db     
Bio::Chaos::FeatureUtil sequence and feature utilities     
Bio::Chaos::Handler::base_handler      
Bio::Chaos::Handler::gff3_to_chaos      
Bio::Chaos::Parser::base_parser      
Bio::Chaos::Parser::fasta fasta sequence input/output stream     
Bio::Chaos::Parser::gff3      
Bio::Chaos::Root root utility class for chaos objects    0.02
Bio::Chaos::XSLTHelper chains xslts     

Documentation

Bio::Chaos::Handler::base_transformer DESCRIPTION of Object 
Bio::Parser::BaseParser DESCRIPTION of Object 
Bio::Parser::gff3 gff sequence input/output stream 
Bio::Parser::gff3_to_chaos  
cx-chadoxml2chaos.pl  
cx-chaos2chadoxml.pl  
cx-genbank2chaos.pl.pl  
cx-query-chado.pl  

Other Files

xsl/README