Bio-Das-ProServer

This Release

Bio-Das-ProServer-2.10

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10 Dec 2008 ** UNAUTHORIZED RELEASE **

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CPAN Testers

PASS (50) FAIL (114) UNKNOWN (2) [ View Reports ] [ Perl/Platform Version Matrix ]

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License

Perl (Artistic and GPL)

Special Files

Build.PL
Changes

MANIFEST
META.yml

Makefile.PL
README

Modules

Bio::Das::ProServer			553
Bio::Das::ProServer::Authenticator	authenticates DAS requests		549
Bio::Das::ProServer::Authenticator::http	authenticates DAS requests by issuing requests to a remote authority		549
Bio::Das::ProServer::Authenticator::ip	authenticates DAS requests by IP address		453
Bio::Das::ProServer::Config	configuration parsing and hooks	UNAUTHORIZED	548
Bio::Das::ProServer::SourceAdaptor	base class for sources	UNAUTHORIZED	554
Bio::Das::ProServer::SourceAdaptor::Transport::bed12	DBI-like access to a BED file		548
Bio::Das::ProServer::SourceAdaptor::Transport::bioseqio	A ProServer transport module that works off any flat file that Bio::SeqIO supports.	UNAUTHORIZED	528
Bio::Das::ProServer::SourceAdaptor::Transport::csv	Comma-separated-values transport layer		531
Bio::Das::ProServer::SourceAdaptor::Transport::dbi	A DBI transport layer (actually customised for MySQL)	UNAUTHORIZED	546
Bio::Das::ProServer::SourceAdaptor::Transport::ensembl			535
Bio::Das::ProServer::SourceAdaptor::Transport::file		UNAUTHORIZED	528
Bio::Das::ProServer::SourceAdaptor::Transport::generic	A generic transport layer for deriving others from	UNAUTHORIZED	528
Bio::Das::ProServer::SourceAdaptor::Transport::getz	Pulls features over command-line SRS/getz transport	UNAUTHORIZED	528
Bio::Das::ProServer::SourceAdaptor::Transport::oracle	Oracle/DBI transport layer	UNAUTHORIZED	528
Bio::Das::ProServer::SourceAdaptor::Transport::sif			544
Bio::Das::ProServer::SourceAdaptor::Transport::wgetz	A ProServer transport module for wgetz (SRS web access)	UNAUTHORIZED	548
Bio::Das::ProServer::SourceAdaptor::all_in_group			549
Bio::Das::ProServer::SourceAdaptor::bed12
Bio::Das::ProServer::SourceAdaptor::bioseq		UNAUTHORIZED	524
Bio::Das::ProServer::SourceAdaptor::grouped_db			548
Bio::Das::ProServer::SourceAdaptor::proxy			524
Bio::Das::ProServer::SourceAdaptor::sif			537
Bio::Das::ProServer::SourceAdaptor::simple		UNAUTHORIZED	549
Bio::Das::ProServer::SourceAdaptor::simple_interaction			549
Bio::Das::ProServer::SourceAdaptor::simple_volmap			524
Bio::Das::ProServer::SourceAdaptor::simpledb	Builds simple DAS features from a database		524
Bio::Das::ProServer::SourceAdaptor::styletest			548
Bio::Das::ProServer::SourceHydra	A runtime factory for B::D::P::SourceAdaptors		549
Bio::Das::ProServer::SourceHydra::dbi	A database-backed implementation of B::D::P::SourceHydra		548
Bio::Das::ProServer::SourceHydra::sql	A database-backed implementation of B::D::P::SourceHydra		506

Bio-Das-ProServer

Modules

Other Files