Todd Harris > Bio-GMOD

Bio-GMOD

This Release Bio-GMOD-0.028  [Download] [Browse 07 Jul 2005
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Special Files
Changes
Makefile.PL
MANIFEST
META.yml
README

Modules

Bio::GMOD Unified API for Model Organism Databases    0.028
Bio::GMOD::Adaptor Generic factory for Bio::GMOD::Adaptor::* objects     
Bio::GMOD::Adaptor::FlyBase Defaults for programmatically interacting with Wormbase     
Bio::GMOD::Adaptor::SGD Defaults for programmatically interacting with SGD     
Bio::GMOD::Adaptor::WormBase Defaults for programmatically interacting with Wormbase     
Bio::GMOD::Adaptor::generic A generic adaptor for working with multiple MODs simultaneously     
Bio::GMOD::Admin::Archive      
Bio::GMOD::Admin::Monitor Monitor the status of an installed MOD     
Bio::GMOD::Admin::Monitor::WormBase WormBase monitoring utils     
Bio::GMOD::Admin::Monitor::acedb Monitor acedb/sgifaceserver     
Bio::GMOD::Admin::Monitor::blat Monitor a BLAT server     
Bio::GMOD::Admin::Monitor::httpd Monitor httpd     
Bio::GMOD::Admin::Monitor::mysqld Monitor mysqld     
Bio::GMOD::Admin::Update Generics methods for updating a Bio::GMOD installation     
Bio::GMOD::Admin::Update::WormBase Methods for updating a WormBase installation     
Bio::GMOD::Query Execute generic queries for different MODs     
Bio::GMOD::Query::FlyBase      
Bio::GMOD::Query::WormBase Defaults for programmatically interacting with Wormbase     
Bio::GMOD::StandardURLs Discover and fetch Standard URLs from MODs     
Bio::GMOD::Util::CheckVersions Find current versions of GMOD installations     
Bio::GMOD::Util::CheckVersions::WormBase Versioning code for WormBase     
Bio::GMOD::Util::Mirror File and directory mirroring     
Bio::GMOD::Util::Rearrange Named parameter processing     
Bio::GMOD::Util::Status Message processing for Bio::GMOD     
GuessDirectories      

Documentation

$file Maintain a MOD installation 
Bio::GMOD::Admin::Archive::WormBase archiving of WormBase releases 
WormBase::Archive::Build Create archives of Wormbase releases 
docs/Bio-GMOD-introduction.pod  
gmod_fetch_features.pl gmod_update_installation.pl - Maintain a MOD installation 
gmod_update_installation-wormbase.pl  
gmod_update_installation.pl Maintain a MOD installation 

Other Files

cgi-bin/README