Todd Harris > Bio-GMOD > Bio::GMOD::Adaptor::WormBase

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NAME ^

Bio::GMOD::Adaptor::WormBase - Defaults for programmatically interacting with Wormbase

SYNPOSIS ^

  my $adaptor = Bio::GMOD::Adaptor::WormBase->new();

DESCRIPTION ^

Bio::GMOD::Adaptor::WormBase objects are created internally by the new() method provided by Bio::GMOD::Adaptor. Adaptor::* objects contain appropriate defaults for interacting programmatically with the GMOD of choice.

Defaults are read dynamically from the WormBase server at runtime. This helps to insulate your scripts from changes in the WormBase infrastructure. If using Bio::GMOD offline, defaults will be populated from those hard-coded in this adaptor. You may also supply these defaults as hash=>key pairs to the new method.

For descriptions of all currently known parameters, see Bio::GMOD::Adaptor::WormBase.pm or the default list maintained at http://dev.wormbase.org/db/gmod/defaults

BUGS ^

None reported.

SEE ALSO ^

Bio::GMOD

AUTHOR ^

Todd W. Harris <harris@cshl.edu>.

Copyright (c) 2003-2005 Cold Spring Harbor Laboratory.

This library is free software; you can redistribute it and/or modify it under the same terms as Perl itself.

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