Changes for version 1.31

  • with DateTime::Format::Flexible, which appears to be maintained more responsively.

Modules

A data model and utility API for the MAGE-TAB format.
MAGE-TAB array design class
MAGE-TAB assay class
Abstract base class for all MAGE-TAB classes.
MAGE-TAB user-defined comment class
MAGE-TAB composite element class
MAGE-TAB contact class
MAGE-TAB controlled term class
Abstract data class
MAGE-TAB data acquisition class
MAGE-TAB data file class
MAGE-TAB data matrix class
MAGE-TAB database entry class
Abstract design element class
MAGE-TAB edge class
Abstract event class
MAGE-TAB extract class
MAGE-TAB experimental factor class
MAGE-TAB experimental factor class
MAGE-TAB feature class
MAGE-TAB investigation class
MAGE-TAB labeled extract class
Abstract material class
MAGE-TAB matrix column class
MAGE-TAB matrix row class
MAGE-TAB measurement class
Abstract node class
MAGE-TAB data acquisition class
MAGE-TAB parameter value class
MAGE-TAB protocol class
MAGE-TAB protocol application class
MAGE-TAB protocol parameter class
MAGE-TAB publication class
MAGE-TAB reporter class
MAGE-TAB SDRF class
MAGE-TAB SDRF row class
MAGE-TAB sample class
MAGE-TAB source class
MAGE-TAB term source class
custom data types for Bio::MAGETAB
A storage class used to track Bio::MAGETAB object creation.
A persistent storage class used to track Bio::MAGETAB object creation and insertion into a relational database.
A Tangram-based object persistence class for MAGE-TAB.
A parser/validator for MAGE-TAB documents.
Data matrix parser class.
An abstract class providing methods for handling tab-delimited files.
An abstract class providing methods for handling tab-delimited files.
A utility class providing methods to correct some common errors in ArrayExpress MAGE-TAB documents.
Export of MAGE-TAB objects.
Export of MAGE-TAB ArrayDesign objects.
Visualization of MAGE-TAB objects.
Export of MAGE-TAB Investigation objects.
Export of MAGE-TAB SDRF objects.
Abstract MAGE-TAB exporter class.