Bio::PanGenome::FilterFullClusters - Take an a clusters file from CD-hit and the fasta file and output a fasta file without full clusters
version 1.133090
Take an a clusters file from CD-hit and the fasta file and output a fasta file without full clusters use Bio::PanGenome::FilterFullClusters;
my $obj = Bio::PanGenome::FilterFullClusters->new( clusters_filename => $cluster_file, fasta_file => $fasta_file, number_of_input_files => 10, output_file => 'filtered_file' ); $obj->filter_full_clusters_from_fasta();
Andrew J. Page <ap13@sanger.ac.uk>
This software is Copyright (c) 2013 by Wellcome Trust Sanger Institute.
This is free software, licensed under:
The GNU General Public License, Version 3, June 2007
To install Bio::PanGenome, copy and paste the appropriate command in to your terminal.
cpanm
cpanm Bio::PanGenome
CPAN shell
perl -MCPAN -e shell install Bio::PanGenome
For more information on module installation, please visit the detailed CPAN module installation guide.