Bio::Phylo::Identifiable - Objects with unique identifiers
# Actually, you would almost never use this module directly. This is # the base class for other modules. use Bio::Phylo::Identifiable; my $obj = Bio::Phylo::Identifiable->new; print $obj->get_id;
This is the base class for objects in the Bio::Phylo package that need unique identifiers.
Type : Constructor Title : new Usage : my $phylo = Bio::Phylo::Identifiable->new; Function: Instantiates Bio::Phylo::Identifiable object Returns : a Bio::Phylo::Identifiable object Args : NONE
Gets invocant's UID.
Type : Accessor Title : get_id Usage : my $id = $obj->get_id; Function: Returns the object's unique ID Returns : INT Args : None
Compares invocant's UID with argument's UID
Type : Test Title : is_equal Usage : do_something() if $obj->is_equal($other); Function: Compares objects by UID Returns : BOOLEAN Args : Another object to compare with
There is a mailing list at https://groups.google.com/forum/#!forum/bio-phylo for any user or developer questions and discussions.
Also see the manual: Bio::Phylo::Manual and http://rutgervos.blogspot.com
If you use Bio::Phylo in published research, please cite it:
Rutger A Vos, Jason Caravas, Klaas Hartmann, Mark A Jensen and Chase Miller, 2011. Bio::Phylo - phyloinformatic analysis using Perl. BMC Bioinformatics 12:63. http://dx.doi.org/10.1186/1471-2105-12-63
To install Bio::Phylo, copy and paste the appropriate command in to your terminal.
cpanm
cpanm Bio::Phylo
CPAN shell
perl -MCPAN -e shell install Bio::Phylo
For more information on module installation, please visit the detailed CPAN module installation guide.