Emma Hastings > EBI-FGPT-FuzzyRecogniser > EBI::FGPT::FuzzyRecogniser::OntologyTerm::Annotation

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EBI-FGPT-FuzzyRecogniser_0.09.tar.gz

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Module Version: 0.09   Source  

NAME ^

EBI::FGPT::FuzzyRecogniser::OntologyTerm::Annotation

SYNOPSIS ^

  EBI::FGPT::FuzzyRecogniser::OntologyTerm::Annotation contains two fields- value
  and normalised_value

  my $annotationToMatch =
  EBI::FGPT::FuzzyRecogniser::OntologyTerm::Annotation->new( value => $string_to_match );

METHODS

normalise()

Normalises a string by changing it lowercase and splitting into 4-grams.

compare()

Counts how many n-grmas are shared between annotations

AUTHOR ^

Emma Hastings , <ehastings@cpan.org>

ACKNOWLEDGEMENTS ^

Tomasz Adamusiak <tomasz@cpan.org>

COPYRIGHT AND LICENSE ^

Copyright [2011] EMBL - European Bioinformatics Institute

Licensed under the Apache License, Version 2.0 (the "License"); you may not use this file except in compliance with the License. You may obtain a copy of the License at http://www.apache.org/licenses/LICENSE-2.0 Unless required by applicable law or agreed to in writing, software distributed under the License is distributed on an "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. See the License for the specific language governing permissions and limitations under the License.

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