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Gavin Sherlock > GO-TermFinder


This Release GO-TermFinder-0.86  [Download] [Browse 19 Nov 2009
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License open_source
Special Files


GO::AnnotatedGene     0.11
GO::Annotation     0.11
GO::AnnotationProvider abstract base class defining interface for how Annotation information should be provided     0.12
GO::AnnotationProvider::AnnotationParser parses a gene annotation file     0.15
GO::Node provides information about a node in the Gene Ontology     0.16
GO::OntologyProvider abstract base class providing API for the provision on Gene Ontology information     0.12
GO::OntologyProvider::OboParser Provides API for retrieving data from Gene Ontology obo file.     0.01
GO::OntologyProvider::OntologyParser Provides API for retrieving data from Gene Ontology files     0.15
GO::Reference     0.1
GO::TermFinder identify GO nodes that annotate a group of genes with a significant p-value     0.86
GO::TermFinderReport::Html prints an html table of the results of GO::TermFinder     0.12
GO::TermFinderReport::Text prints results of GO::TermFinder as a text report     0.1
GO::Utils::File simply utility module for dealing with file parsing     0.12
GO::Utils::General provides some general utilities for clients of other GO classes     0.11
GO::View Creates a gif or png image for visualizing the GO DAG     0.15
GO::View::GD a helper class for GO::View to deal with the image     0.11