Alexandre Masselot > InSilicoSpectro-Databanks > InSilicoSpectro::Databanks

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InSilicoSpectro-Databanks-0.0.43.tar.gz

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Module Version: 0.0.43   Source  

NAME ^

InSilicoSpectro::Databanks - parsing protein/nucleotides sequence databanks (fasta, uniprot...)

SYNOPSIS ^

$/="//\n"; while (<FDIN>){ my $dbu=InSilicoSpectro::Databanks::DBEntryUniprot->new; $dbu->readDat($_); my @tmp=$dbu->generateDerivedForms(); unless ( && @tmp){ $dbu->printFasta; $origSeq = $dbu->sequence; } foreach (@tmp){ if ($_->sequence ne $origSeq){ $_->printFasta; } } }

EXPORT ^

A list of functions that can be exported. You can delete this section if you don't export anything, such as for a purely object-oriented module.

FUNCTIONS ^

AUTHOR ^

Alexandre Masselot, <alexandre.masselot@genebio.com>

BUGS ^

Please report any bugs or feature requests to bug-insilicospectro-databanks@rt.cpan.org, or through the web interface at http://rt.cpan.org/NoAuth/ReportBug.html?Queue=InSilicoSpectro-Databanks. I will be notified, and then you'll automatically be notified of progress on your bug as I make changes.

ACKNOWLEDGEMENTS ^

COPYRIGHT & LICENSE ^

Copyright 2006 Alexandre Masselot, all rights reserved.

This program is free software; you can redistribute it and/or modify it under the same terms as Perl itself.

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