NAME

InSilicoSpectro::Spectra::PhenyxPeakDescriptor

SYNOPSIS

  my $t=XML::Twig->new->parsefile($file);
  my @el=$t->get_xpath("ple:ItemOrder");
  my @pd;
  foreach(@el){
    my $pd=InSilicoSpectro::Spectra::PhenyxPeakDescriptor->new();
    $pd->readTwigEl($_);
    $pd->writeXml();
    push @pd, $pd;
  }
  print "comparing to first node\n";
  foreach(1..$#pd){
    print "$_ -> ".(($pd[$_]->equalsTo($pd[0]))?"OK":"!=")."\n";
  }

DESCRIPTION

List of fields name related to peak Merely contains a list of names (ex ['mass', 'intensity', 'prob'])

FUNCTIONS

METHODS

my $pd=InSilicoSpectro::Spectra::PhenyxPeakDescriptor->new([\%h])

$pd->writeXml()

$pd->readTwigEl($tw)

Read info from an Xml::Twig node tagged <ple:ItemOrder>

EXAMPLES

SEE ALSO

COPYRIGHT

Copyright (C) 2004-2005 Geneva Bioinformatics www.genebio.com

This library is free software; you can redistribute it and/or modify it under the terms of the GNU Lesser General Public License as published by the Free Software Foundation; either version 2.1 of the License, or (at your option) any later version.

This library is distributed in the hope that it will be useful, but WITHOUT ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU Lesser General Public License for more details.

You should have received a copy of the GNU Lesser General Public License along with this library; if not, write to the Free Software Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA

AUTHORS

Alexandre Masselot, www.genebio.com