indexXml.pl
Builds a xml index for large xml files. From a source.xml file, extract info as requested in a indexmaker.xml and write an index.xml
See perldoc InSilicoSpectro::Utils::XML::SaxIndexMaker for the indexmaker and output formats.
See the lib/Phenyx/Utils/SaxIndexMaker/test directory for examples
The file to be indexed (typically a large file, too large to be handled by DOM technology).
If this file is gziped, it will be gunziped temporarly in the defaut temp directory
The file with the description of what is to be index from the source file.
./prepareDb.pl --src=dat:/tmp/human.seq -db=SwissProtHuman --xtraconfigtags="phenyx.databases:/tmp;phenyx.users.default=/tmp"
Copyright (C) 2004-2005 Geneva Bioinformatics www.genebio.com
This library is free software; you can redistribute it and/or modify it under the terms of the GNU Lesser General Public License as published by the Free Software Foundation; either version 2.1 of the License, or (at your option) any later version.
This library is distributed in the hope that it will be useful, but WITHOUT ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU Lesser General Public License for more details.
You should have received a copy of the GNU Lesser General Public License along with this library; if not, write to the Free Software Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
Alexandre Masselot, www.genebio.com
