Erick Antezana > ONTO-PERL > OBO::APO::APO_ID_Term_Map

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NAME ^

OBO::APO::APO_ID_Term_Map - A map between APO IDs and term names.

SYNOPSIS ^

use OBO::APO::APO_ID_Term_Map;

$apo_id_set = APO_ID_Term_Map -> new;

$apo_id_set->file("ontology.ids");

$file = $apo_id_set -> file;

$size = $apo_id_set -> size;

$apo_id_set->file("APO");

if ($apo_id_set->add("APO:C1234567")) { ... }

$new_id = $apo_id_set->get_new_id("APO", "C");

DESCRIPTION ^

The OBO::APO::APO_ID_Term_Map class implements a map for storing APO IDs and their corresponding names.

AUTHOR ^

Erick Antezana, <erick.antezana -@- gmail.com>

COPYRIGHT AND LICENSE ^

Copyright (c) 2006-2014 by Erick Antezana

This library is free software; you can redistribute it and/or modify it under the same terms as Perl itself, either Perl version 5.8.7 or, at your option, any later version of Perl 5 you may have available.

get_new_id

  Usage    - $map->get_new_id("APO", "P", "cell cycle") or $map->get_new_id("APO", "Pa", "cell cycle")
  Returns  - a new APO ID (string)
  Args     - idspace (string), subnamespace (string), term (string)
  Function - get a new APO ID and insert it (put) into this map
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