getStString.pl - This program returns the name of a semantic type given its abbreviation.
This program takes in a semantic type abbreviation and returns its full name.
Usage: getStString.pl [OPTIONS] <semantic type>
Semantic type (ST) from the Unified Medical Language System (UMLS)
File containing ST abbreviations. One abbreviation per line. For example:
clna invt podg orga blor plnt neop
Sets the debug flag for testing
Username is required to access the umls database on MySql unless it was specified in the my.cnf file at installation
Password is required to access the umls database on MySql unless it was specified in the my.cnf file at installation
Hostname where mysql is located. DEFAULT: localhost
The socket your mysql is using. DEFAULT: /tmp/mysql.sock
Database contain UMLS DEFAULT: umls
Displays the quick summary of program options.
Displays the version information.
List of CUIs that are associated with the input term
Bridget T. McInnes, University of Minnesota
Copyright (c) 2007-2009,
Bridget T. McInnes, University of Minnesota bthomson at cs.umn.edu Ted Pedersen, University of Minnesota Duluth tpederse at d.umn.edu Siddharth Patwardhan, University of Utah, Salt Lake City email@example.com Serguei Pakhomov, University of Minnesota Twin Cities firstname.lastname@example.org
This program is free software; you can redistribute it and/or modify it under the terms of the GNU General Public License as published by the Free Software Foundation; either version 2 of the License, or (at your option) any later version.
This program is distributed in the hope that it will be useful, but WITHOUT ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public License for more details.
You should have received a copy of the GNU General Public License along with this program; if not, write to:
The Free Software Foundation, Inc., 59 Temple Place - Suite 330, Boston, MA 02111-1307, USA.