Ted Pedersen > WebService-UMLSKS-Similarity > ws-test

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NAME ^

ws-test

SYNOPSIS ^

Basic Usuage

perl ws-test.pl --config configfilename --login loginfile --testfile test_file

--config : Instead of providing sources, relations and directions on command line, they can be specified using a configuration file, which can be provided with this option. It takes complete path and name of the file. The config file is expected in following format:

SAB :: include SNOMEDCT,MSH
REL :: include PAR,RB
DIR :: include U,H
RELA :: include RB-has_part

--login : User can specify login credentials through the file, which should be of form:

username :: xyz
password :: pqr

--testfile : User can specify the list of test CUIs stored in the test_file throught this option. The program would call getAllowablePath.pl for all the CUI pairs sequentially.

Follwing is a sample output

Enter username to connect to UMLSKS:mchoudhari
Enter password:
An output file output.txt would be generated.

DESCRIPTION ^

This program is used for testing a large data set. It accepts the test file as command line argument and sequentially calls getAllowablePath.pl for each test CUI pair.

SEE ALSO ^

ValidateTerm.pm GetUserData.pm Query.pm ConnectUMLS.pm

AUTHORS ^

Mugdha Choudhari University of Minnesota Duluth <chou0130 at d.umn.edu>

Ted Pedersen, University of Minnesota Duluth <tpederse at d.umn.edu>

COPYRIGHT ^

Copyright (C) 2011, Mugdha Choudhari, Ted Pedersen

This program is free software; you can redistribute it and/or modify it under the terms of the GNU General Public License as published by the Free Software Foundation; either version 2 of the License, or (at your option) any later version.

This program is distributed in the hope that it will be useful, but WITHOUT ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public License for more details.

You should have received a copy of the GNU General Public License along with this program; if not, write to The Free Software Foundation, Inc., 59 Temple Place - Suite 330, Boston, MA 02111-1307, USA.

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