Bio::Gonzales::Search::IO::BLAST
Bio::Gonzales::Search::IO::BLAST qw(makeblastdb instantblast)
Creates a blast database with the config options supplied. Config options are:
%config = ( 'seq_file!' => undef, title => 'basename of seq_file', parse_seqids => 1, hash_index => 1, 'alphabet!' => 'n(ucleotide)? || p(rotein)? || d(na)? || a(a)?', db_prefix => 'basename of seq_file.bdb', wd => './', );
Options with ! are required.
!
jw bargsten, <joachim.bargsten at wur.nl>
<joachim.bargsten at wur.nl>
To install Bio::Gonzales, copy and paste the appropriate command in to your terminal.
cpanm
cpanm Bio::Gonzales
CPAN shell
perl -MCPAN -e shell install Bio::Gonzales
For more information on module installation, please visit the detailed CPAN module installation guide.