Bio::NEXUS::HistoryBlock - Represents a HISTORY block of a NEXUS file
$block_object = new Bio::NEXUS::HistoryBlock('history', $block, $verbose);
This is a class representing a history block in NEXUS file
All feedback (bugs, feature enhancements, etc.) are greatly appreciated.
Chengzhi Liang (liangc@umbi.umd.edu) Justin Reese Tom Hladish (tjhladish at yahoo)
$Revision: 1.28 $
Title : new Usage : block_object = new Bio::NEXUS::HistoryBlock($block_type, $commands, $verbose); Function: Creates a new Bio::NEXUS::HistoryBlock object Returns : Bio::NEXUS::HistoryBlock object Args : type (string), the commands/comments to parse (array ref), and a verbose flag (0 or 1; optional) Comments:
Name : equals Usage : $block->equals($another); Function: compare if two Block objects are equal Returns : boolean Args : a Block object
Name : rename_otus Usage : $nexus->rename_otus(\%translation); Function: rename all OTUs Returns : a new nexus object with new OTU names Args : a ref to hash based on OTU name pairs
Title : add_otu_clone Usage : ... Function: ... Returns : ... Args : ...
To install Bio::NEXUS, copy and paste the appropriate command in to your terminal.
cpanm
cpanm Bio::NEXUS
CPAN shell
perl -MCPAN -e shell install Bio::NEXUS
For more information on module installation, please visit the detailed CPAN module installation guide.