NAME
Bio::VertRes::Config::Pipelines::TophatMapping - Base class for the Tophat mapper
VERSION
version 1.133090
SYNOPSIS
Base class for the Tophat mapper use Bio::VertRes::Config::Pipelines::TophatMapping;
my $pipeline = Bio::VertRes::Config::Pipelines::TophatMapping->new(
database => 'abc',
reference => 'Staphylococcus_aureus_subsp_aureus_ABC_v1',
limits => {
project => ['ABC study'],
species => ['EFG']
},
);
$pipeline->to_hash();
AUTHOR
Andrew J. Page <ap13@sanger.ac.uk>
COPYRIGHT AND LICENSE
This software is Copyright (c) 2013 by Wellcome Trust Sanger Institute.
This is free software, licensed under:
The GNU General Public License, Version 3, June 2007