Bio::SeqAlignment - Aligning (and pseudo aligning) biological sequences

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The Bio::SeqAlignment distribution provides a wrapper over collection of tools, static and dynamic libraries for (pseudo-)aligning biological. sequences. The overarching aim is to provide a Perl ecosystem that can be used to build components that can...

CHRISARG/Bio-SeqAlignment-0.02 - 24 Mar 2024 02:58:28 UTC - Search in distribution

Alien::SeqAlignment::hmmer3 - find, build and install the hmmer3 tools

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This distribution provides HMMER3 so that it can be used by other Perl distributions that are on CPAN. The source code will be downloaded from the HMMER3 website, if the HMMER3 is not found in the system path. The url used is : http://eddylab.org/sof...

CHRISARG/Alien-SeqAlignment-hmmer3-0.03 - 24 Mar 2024 03:13:58 UTC - Search in distribution

Alien::SeqAlignment::last - find, build and install the last tools

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This distribution provides last so that it can be used by other Perl distributions that are on CPAN. The source code will be downloaded from the last Gitlab repo, and if that fails it will use the location of a fork by the author of this Perl module....

CHRISARG/Alien-SeqAlignment-last-0.02 - 24 Mar 2024 03:31:46 UTC - Search in distribution

Alien::SeqAlignment::bowtie2 - find, build and install the bowtie2 tools

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This distribution provides bowtie2 so that it can be used by other Perl distributions that are on CPAN. The source code will be downloaded from the github repository and installed in a private location if it is not already installed in your system. T...

CHRISARG/Alien-SeqAlignment-bowtie2-0.03 - 24 Mar 2024 04:15:40 UTC - Search in distribution

Alien::SeqAlignment::edlib - find, build and install the edlib library

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This distribution provides edlib so that it can be used by other Perl distributions that are on CPAN. The source code will be downloaded from the edlib github repo, and if that fails it will use the location of a fork but the author of this module. C...

CHRISARG/Alien-SeqAlignment-edlib-0.09 - 24 Mar 2024 04:24:42 UTC - Search in distribution

Task::FASTQTools

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A collection of tools to convert, filter and analyze FASTQ files....

CHRISARG/Task-FASTQTools-0.01 - 30 Sep 2023 00:53:30 UTC - Search in distribution

Alien::SeqAlignment::cutadapt - Find or install cutadapt

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This distribution provides the python tool cutadapt so that it can be used by other Perl distributions that are on CPAN. It does this by first trying to detect an existing install of cutadapt on your system. If found it will use that. If it cannot be...

CHRISARG/Alien-SeqAlignment-cutadapt-0.05 - 24 Mar 2024 04:07:54 UTC - Search in distribution

Alien::SeqAlignment::MMseqs2 - find, build and install the mmseqs2 tools

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This distribution provides MMseqs2 so that it can be used by other Perl distributions that are on CPAN. The source code will be downloaded from the MMseqs2 website, if it is not found in the system path. The program will then be built and installed i...

CHRISARG/Alien-SeqAlignment-MMseqs2-0.02 - 24 Mar 2024 03:44:49 UTC - Search in distribution

Alien::SeqAlignment::minimap2 - A Perl wrapper for the minimap2 binary executables

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This distribution provides minimap2 so that it can be used by other Perl distributions that are on CPAN. The source code will be downloaded from the github repository and installed in a private location if it is not already installed in your system....

CHRISARG/Alien-SeqAlignment-minimap2-0.02 - 24 Mar 2024 03:48:49 UTC - Search in distribution

Alien::SeqAlignment::parasail - find, build and install the parasail library

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This distribution provides parasail so that it can be used by other Perl distributions that are on CPAN. The source code will be downloaded from the parasail github repo, and if that fails it will use the location of a fork but the author of this mod...

CHRISARG/Alien-SeqAlignment-parasail-0.05 - 24 Mar 2024 05:15:08 UTC - Search in distribution

Acme::CPANAuthors::CPAN::Streaks::MonthlyReleases::Current - Authors with ongoing month releases streak (do a release every month)

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Current standings (as of 2024-04-12, produced by cpan-streaks): +-----------+-----+------------+-------------+ | author | len | start_date | status | +-----------+-----+------------+-------------+ | BINGOS | 217 | 2006-03 | might-break | | ETHER | 14...

PERLANCAR/Acme-CPANAuthorsBundle-CPAN-Streaks-20240412.0 - 12 Apr 2024 04:25:16 UTC - Search in distribution

• Acme::CPANAuthors::CPAN::Streaks::MonthlyDistributions::Current - Authors with ongoing monthly distributions streak (release a new [for them] distribution every month)
• Acme::CPANAuthors::CPAN::Streaks::MonthlyNewDistributions::Current - Authors with ongoing monthly new distributions streak (release a new distribution every month)