Search results for "module:Bio::Coordinate::Graph"
Bio::Coordinate::Graph - Finds shortest path between nodes in a graph.
This class calculates the shortest path between input and output coordinate systems in a graph that defines the relationships between them. This class is primarely designed to analyze gene-related coordinate systems. See Bio::Coordinate::GeneMapper. ...
CJFIELDS/Bio-Coordinate-1.007001 - 15 Dec 2016 05:03:14 UTC
Bio::DB::Sam - Read SAM/BAM database files
This module provides a Perl interface to the libbam library for indexed and unindexed SAM/BAM sequence alignment databases. It provides support for retrieving information on individual alignments, read pairs, and alignment coverage information across...
LDS/Bio-SamTools-1.43 - 12 Feb 2016 19:33:32 UTC
Bio::Coordinate::GeneMapper - Transformations between gene related coordinate systems.
Bio::Coordinate::GeneMapper is a module for simplifying the mappings of coodinate locations between various gene related locations in human genetics. It also adds a special human genetics twist to coordinate systems by making it possible to disable t...
CJFIELDS/Bio-Coordinate-1.007001 - 15 Dec 2016 05:03:14 UTC
Bio::Chado::Schema::Result::Sequence::Featureloc
The location of a feature relative to another feature. Important: interbase coordinates are used. This is vital as it allows us to represent zero-length features e.g. splice sites, insertion points without an awkward fuzzy system. Features typically ...
RBUELS/Bio-Chado-Schema-0.20000 - 06 Jul 2012 19:06:31 UTC