Search results for "module:Boulder::Blast"
Boulder::Blast - Parse and read BLAST files
The *Boulder::Blast* class parses the output of the Washington University (WU) or National Cenber for Biotechnology Information (NCBI) series of BLAST programs and turns them into *Stone* records. You may then use the standard Stone access methods to...
LDS/Boulder-1.30 - 14 Dec 2002 02:06:29 UTC
Boulder::Blast::WU - Parse and read WU-BLAST files
Specialized parser for WUBLAST format BLAST output. Loaded automatically by Boulder::Blast....
LDS/Boulder-1.30 - 14 Dec 2002 02:06:29 UTC
Boulder::Blast::NCBI - Parse and read NCBI BLAST files
Specialized parser for NCBI format BLAST output. Loaded automatically by Boulder::Blast....
LDS/Boulder-1.30 - 14 Dec 2002 02:06:29 UTC
Boulder::String - Read and write tag/value data from a string.
Boulder::String provides access to Boulder IO hierarchical tag/value data. Stone objects printed to the tied string are appended to the string in Boulder format....
LDS/Boulder-1.30 - 14 Dec 2002 02:06:29 UTC
Boulder::Stream - Read and write tag/value data from an input stream
Boulder::Stream provides stream-oriented access to Boulder IO hierarchical tag/value data. It can be used in a magic tied filehandle mode, as shown in the synopsis, or in object-oriented mode. Using tied filehandles, Stone objects are read from input...
LDS/Boulder-1.30 - 14 Dec 2002 02:06:29 UTC
Boulder::Omim - Fetch Omim data records as parsed Boulder Stones
Boulder::Omim provides retrieval and parsing services for OMIM records Boulder::Omim provides retrieval and parsing services for NCBI Omim records. It returns Omim entries in Stone format, allowing easy access to the various fields and values. Boulde...
LDS/Boulder-1.30 - 14 Dec 2002 02:06:29 UTC
Boulder::Medline - Fetch Medline data records as parsed Boulder Stones
Boulder::Medline provides retrieval and parsing services for Medline records Boulder::Medline provides retrieval and parsing services for NCBI Medline records. It returns Medline entries in Stone format, allowing easy access to the various fields and...
LDS/Boulder-1.30 - 14 Dec 2002 02:06:29 UTC
Boulder::Unigene - Fetch Unigene data records as parsed Boulder Stones
Boulder::Unigene provides retrieval and parsing services for UNIGENE records Boulder::Unigene provides retrieval and parsing services for NCBI Unigene records. It returns Unigene entries in Stone format, allowing easy access to the various fields and...
LDS/Boulder-1.30 - 14 Dec 2002 02:06:29 UTC
Boulder::LocusLink - Fetch LocusLink data records as parsed Boulder Stones
Boulder::LocusLink provides retrieval and parsing services for LocusLink records Boulder::LocusLink provides retrieval and parsing services for NCBI LocusLink records. It returns Unigene entries in Stone format, allowing easy access to the various fi...
LDS/Boulder-1.30 - 14 Dec 2002 02:06:29 UTC
Boulder::Swissprot - Fetch SwissProt data records as parsed Boulder Stones
== missing ==...
LDS/Boulder-1.30 - 14 Dec 2002 02:06:29 UTC
Boulder::Genbank - Fetch Genbank data records as parsed Boulder Stones
Boulder::Genbank provides retrieval and parsing services for NCBI Genbank-format records. It returns Genbank entries in Stone format, allowing easy access to the various fields and values. Boulder::Genbank is a descendent of Boulder::Stream, and prov...
LDS/Boulder-1.30 - 14 Dec 2002 02:06:29 UTC