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Search results for "dist:Bio-NeXMLIO Bio::AlignIO"

Bio::AlignIO::nexml - NeXML format sequence alignment input/output stream driver River stage zero No dependents

This object can transform Bio::SimpleAlign objects to and from NeXML format. For more information on NeXML, visit <http://www.nexml.org>....

CJFIELDS/Bio-NeXMLIO-1.7.3 - 11 Sep 2018 18:47:25 UTC

Bio::NexmlIO - stream handler for NeXML documents River stage zero No dependents

Bio::NexmlIO is an I/O handler for a NeXML document. A NeXML document can represent three different data types: simple sequences, alignments, and trees. NexmlIO has four main methods next_tree, next_seq, next_aln, and write. NexmlIO returns bioperl s...

CJFIELDS/Bio-NeXMLIO-1.7.3 - 11 Sep 2018 18:47:25 UTC

Bio::Nexml::Factory - A factory module for creating BioPerl and Bio::Phylo objects from/to nexml documents River stage zero No dependents

This is a factory/utility module in the Nexml namespace. It contains methods that are needed by multiple modules. This module handles the creation of BioPerl objects from Bio::Phylo objects and vice versa, which is used to read and write nexml docume...

CJFIELDS/Bio-NeXMLIO-1.7.3 - 11 Sep 2018 18:47:25 UTC
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