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Search results for "dist:BioPerl Bio::Tools::Spidey::Exon"

Bio::Tools::Spidey::Exon - A single exon determined by an alignment River stage two • 60 direct dependents • 65 total dependents

This class inherits from Bio::SeqFeature::SimilarityPair and represents an exon on a genomic sequence determined by similarity, that is, by aligning an EST sequence (using Spidey in this case). Consequently, the notion of query and subject is always ...

CJFIELDS/BioPerl-1.7.8 - 03 Feb 2021 05:15:14 UTC

Bio::Tools::Spidey::Results - Results of a Spidey run River stage two • 60 direct dependents • 65 total dependents

The spidey module provides a parser and results object for spidey output. The spidey results are specialised types of SeqFeatures, meaning you can add them to AnnSeq objects fine, and manipulate them in the "normal" seqfeature manner. The spidey Exon...

CJFIELDS/BioPerl-1.7.8 - 03 Feb 2021 05:15:14 UTC
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