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Search results for "dist:Bio-AlignIO-stockholm Bio::AlignIO::stockholm"

Bio::Index::Stockholm - Interface for indexing Stockholm files River stage one • 1 direct dependent • 1 total dependent
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Indexes Stockholm format alignments such as those from Pfam and Rfam. Returns raw stream data using the ID or a Bio::SimpleAlign object (via Bio::AlignIO). This module also allows for ID parsing using a callback: $inx->id_parser(\&get_id); # make the...

CJFIELDS/Bio-AlignIO-stockholm-1.7.3 - 25 Sep 2018 00:14:27 UTC

Bio::AlignIO::stockholm - stockholm sequence input/output stream River stage one • 1 direct dependent • 1 total dependent
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This object can transform Bio::Align::AlignI objects to and from stockholm flat file databases. This has been completely refactored from the original stockholm parser to handle annotation data and now includes a write_aln() method for (almost) comple...

CJFIELDS/Bio-AlignIO-stockholm-1.7.3 - 25 Sep 2018 00:14:27 UTC
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