Search results for "dist:Bio-Chaos ROOT"
Bio::Chaos::Root - root utility class for chaos objects
Root class for chaos objects this class inherits from Bio::Root::Root, so you get all that juicy stuff too INHERITANCE Bio::Root::Root...
CMUNGALL/Bio-Chaos-0.02 - 02 Sep 2005 18:47:08 UTC
Bio::Chaos - utility class for handling Chaos-XML
This module contains some basic methods for manipulating a Chaos-XML document stored in memory as a Data::Stag tree. This class is fairly minimal. One of the principal ideas being Bio::Chaos is that access to the data model should be directly through...
CMUNGALL/Bio-Chaos-0.02 - 02 Sep 2005 18:47:08 UTC
Bio::Chaos::ChaosGraph - object for representing a chaos-xml dataset
This class allows manipulation of in-memory Chaos documents as Data::Stag nodes, and provides additional methods for traversing the graph structure defined in the Chaos document...
CMUNGALL/Bio-Chaos-0.02 - 02 Sep 2005 18:47:08 UTC
cx-genbank2chaos.pl.pl
Converts a genbank file to a chaos xml file (or a collection of chaos xml files). The genbank file is 'unflattened' in order to infer the relationships between features with the -islands option set, this loops through a list of genbank-formatted file...
CMUNGALL/Bio-Chaos-0.02 - 02 Sep 2005 18:47:08 UTC