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Search results for "dist:Bio-DB-GFF Bio::Map::Position"

Bio::DB::GFF - Storage and retrieval of sequence annotation data River stage one • 2 direct dependents • 2 total dependents

Bio::DB::GFF provides fast indexed access to a sequence annotation database. It supports multiple database types (ACeDB, relational), and multiple schemas through a system of adaptors and aggregators. The following operations are supported by this mo...

CJFIELDS/Bio-DB-GFF-1.7.4 - 08 Jan 2020 20:41:58 UTC

Bio::DB::GFF::Feature - A relative segment identified by a feature type River stage one • 2 direct dependents • 2 total dependents

Bio::DB::GFF::Feature is a stretch of sequence that corresponding to a single annotation in a GFF database. It inherits from Bio::DB::GFF::RelSegment, and so has all the support for relative addressing of this class and its ancestors. It also inherit...

CJFIELDS/Bio-DB-GFF-1.7.4 - 08 Jan 2020 20:41:58 UTC

Bio::DB::GFF::RelSegment - Sequence segment with relative coordinate support River stage one • 2 direct dependents • 2 total dependents

Bio::DB::GFF::RelSegment is a stretch of sequence that can handle relative coordinate addressing. It inherits from Bio::DB::GFF::Segment, and is the base class for Bio::DB::GFF::Feature. In addition to the source sequence, a relative segment has a "r...

CJFIELDS/Bio-DB-GFF-1.7.4 - 08 Jan 2020 20:41:58 UTC
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