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Search results for "dist:Bio-Graphics Bio::Align"

Bio::Graphics::Glyph::phylo_align - The "phylogenetic alignment" glyph River stage one • 2 direct dependents • 2 total dependents

This glyph draws a cladogram for any set of species along with their alignment data in relation to the reference species. At high magnification, base pair alignements will be displayed. At lower magnification, a conservation score plot will be drawn....

CJFIELDS/Bio-Graphics-2.40 - 16 Dec 2016 04:50:36 UTC

Bio::Graphics::Glyph::trace - A glyph that visualizes a trace file River stage one • 2 direct dependents • 2 total dependents

This glyph parses and displays trace information from a file. A generic glyph is used to show where the trace is located and when the display is zoomed in enough to see the sequence, the trace will be drawn. The trace file can only be in SCF format. ...

CJFIELDS/Bio-Graphics-2.40 - 16 Dec 2016 04:50:36 UTC

Bio::Graphics::Glyph::segments - The "segments" glyph River stage one • 2 direct dependents • 2 total dependents

This glyph is used for drawing features that consist of discontinuous segments. Unlike "graded_segments" or "alignment", the segments are a uniform color and not dependent on the score of the segment. METHODS This module overrides the maxdepth() meth...

CJFIELDS/Bio-Graphics-2.40 - 16 Dec 2016 04:50:36 UTC
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