Search results for "dist:Bio-Graphics SPLICE"
Bio::Graphics::Glyph::splice_site - The "splice_site" glyph
This glyph was designed to show an inverted "L" representing splice donors and acceptors. The vertical part of the L points downwards and is positioned in the center of the range (even if the range is quite large). In addition to the usual glyph opti...
CJFIELDS/Bio-Graphics-2.40 - 16 Dec 2016 04:50:36 UTC
Bio::Graphics::Glyph::cds - The "cds" glyph
This glyph draws features that are associated with a protein coding region. At high magnifications, draws a series of boxes that are color-coded to indicate the frame in which the translation occurs. At low magnifications, draws the amino acid sequen...
CJFIELDS/Bio-Graphics-2.40 - 16 Dec 2016 04:50:36 UTC
Bio::Graphics::Glyph::gene - A GFF3-compatible gene glyph
This glyph is used for drawing genes that may have alternatively-spliced transcripts. The various isoforms are stacked on top of each other and given a single label and description that apply to the entire stack. Each individual transcript's name is ...
CJFIELDS/Bio-Graphics-2.40 - 16 Dec 2016 04:50:36 UTC
Bio::Graphics::Glyph::rainbow_gene - A GFF3-compatible gene glyph
This glyph is used for drawing genes that may have alternatively-spliced transcripts. The various isoforms are stacked on top of each other and given a single label and description that apply to the entire stack. Each individual transcript's name is ...
CJFIELDS/Bio-Graphics-2.40 - 16 Dec 2016 04:50:36 UTC
Bio::Graphics::Glyph::decorated_gene - A GFF3-compatible gene glyph with protein decorations
This glyph has the same functionality as the Bio::Graphics::Glyph::gene glyph, but uses the Bio::Graphics::Glyph::decorated_transcript glyph instead of the Bio::Graphics::Glyph::processed_transcript glyph to draw transcripts. One usecase for the 'dec...
CJFIELDS/Bio-Graphics-2.40 - 16 Dec 2016 04:50:36 UTC