Search results for "dist:Bio-ToolBox Bio::DB::SeqFeature::Segment"
Bio::ToolBox::Data - Reading, writing, and manipulating data structure
This module works with the primary Bio::ToolBox Data structure. Simply, it is a complex data structure representing a tabbed-delimited table (array of arrays), with plenty of options for metadata. Many common bioinformatic file formats are simply tab...
TJPARNELL/Bio-ToolBox-1.691 - 13 Oct 2022 18:07:52 UTC
Bio::ToolBox::Data::Feature - Objects representing rows in a data table
A Bio::ToolBox::Data::Feature is an object representing a row in the data table. Usually, this in turn represents an annotated feature or segment in the genome. As such, this object provides convenient methods for accessing and manipulating the value...
TJPARNELL/Bio-ToolBox-1.691 - 13 Oct 2022 18:07:52 UTC
get_datasets.pl - A program to collect data for a list of features
This program will collect dataset values from a variety of sources, including features in a BioPerl Bio::DB::SeqFeature::Store database, binary wig files .wib loaded in a database using Bio::Graphics::Wiggle, bigWig files, bigBed files, Bam alignment...
TJPARNELL/Bio-ToolBox-1.691 - 13 Oct 2022 18:07:52 UTC
Bio::ToolBox::db_helper::big
This module provides support for binary BigWig and BigBed files to the Bio::ToolBox package. It also provides minimal support for a directory of one or more bigWig files as a combined database, known as a BigWigSet....
TJPARNELL/Bio-ToolBox-1.691 - 13 Oct 2022 18:07:52 UTC
correlate_position_data.pl - A script to calculate correlations between two datasets along the length of a feature.
This program will calculate statistics between the positioned scores of two different datasets over a window from an annotated feature or chromosomal segment. These statistics will help determine whether the positions or distribution of scores across...
TJPARNELL/Bio-ToolBox-1.691 - 13 Oct 2022 18:07:52 UTC