Search results for "dist:Bio-ToolBox bio::graphics"
Bio::ToolBox::db_helper - helper interface to various database formats
In most cases, this module does not need to be used directly. The methods available to Bio::ToolBox::Data and Bio::ToolBox::Data::Feature provide convenient access to the methods described here. These are helper subroutines to work with relevant data...
TJPARNELL/Bio-ToolBox-1.691 - 13 Oct 2022 18:07:52 UTC
Bio::ToolBox::SeqFeature - Fast, simple SeqFeature implementation
SeqFeature objects represent functional elements on a genomic or chromosomal sequence, such as genes, transcripts, exons, etc. In many cases, especially genes, they have a hierarchical structure, typically in this order gene mRNA or transcript exon C...
TJPARNELL/Bio-ToolBox-1.691 - 13 Oct 2022 18:07:52 UTC
get_datasets.pl - A program to collect data for a list of features
This program will collect dataset values from a variety of sources, including features in a BioPerl Bio::DB::SeqFeature::Store database, binary wig files .wib loaded in a database using Bio::Graphics::Wiggle, bigWig files, bigBed files, Bam alignment...
TJPARNELL/Bio-ToolBox-1.691 - 13 Oct 2022 18:07:52 UTC
Bio::ToolBox::db_helper::wiggle
This module provides support for legacy binary wiggle (.wib) files. These are not BigWig files, which are supported through the Bio::ToolBox::Data::db_helper::bigwig module. Rather, these are condensed binary representations of text wiggle files deve...
TJPARNELL/Bio-ToolBox-1.691 - 13 Oct 2022 18:07:52 UTC