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Search results for "dist:Bio-Tools-Phylo-PAML KAPPA"

Bio::Tools::Phylo::PAML - Parses output from the PAML programs codeml, baseml, basemlg, codemlsites and yn00 River stage one • 1 direct dependent • 1 total dependent

This module is used to parse the output from the PAML programs codeml, baseml, basemlg, codemlsites and yn00. You can use the Bio::Tools::Run::Phylo::PAML::* modules to actually run some of the PAML programs, but this module is only useful to parse t...

CDRAUG/Bio-Tools-Phylo-PAML-1.7.3 - 01 Jul 2018 12:36:38 UTC

Bio::Tools::Phylo::PAML::Codeml - Parses output from the PAML program codeml River stage one • 1 direct dependent • 1 total dependent

This module is used to parse the output from the PAML program codeml. You can use the Bio::Tools::Run::Phylo::Phylo::PAML::Codeml module to actually run codeml; this module is only useful to parse the output....

CDRAUG/Bio-Tools-Phylo-PAML-1.7.3 - 01 Jul 2018 12:36:38 UTC

Bio::Tools::Phylo::PAML::Result - A PAML result set object River stage one • 1 direct dependent • 1 total dependent

This is a container object for PAML Results....

CDRAUG/Bio-Tools-Phylo-PAML-1.7.3 - 01 Jul 2018 12:36:38 UTC

Bio::Tools::Phylo::PAML::ModelResult - A container for NSSite Model Result from PAML River stage one • 1 direct dependent • 1 total dependent

CDRAUG/Bio-Tools-Phylo-PAML-1.7.3 - 01 Jul 2018 12:36:38 UTC

Bio::Tools::Run::Phylo::PAML::Baseml - Wrapper aroud the PAML program baseml River stage one • 1 direct dependent • 1 total dependent

This is a wrapper around the baseml program of PAML (Phylogenetic Analysis by Maximum Likelihood) package of Ziheng Yang. See http://abacus.gene.ucl.ac.uk/software/paml.html for more information. This module will generate a proper baseml.ctl file and...

CDRAUG/Bio-Tools-Phylo-PAML-1.7.3 - 01 Jul 2018 12:36:38 UTC
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