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Search results for "dist:BioPerl Bio::Root::Storable"

Bio::Root::Storable - Safely store/retrieve objects from disk River stage two • 60 direct dependents • 65 total dependents

Generic module that allows objects to be safely stored/retrieved from disk. Can be inhereted by any BioPerl object. As it will not usually be the first class in the inheretence list, _initialise_storable() should be called during object instantiation...

CJFIELDS/BioPerl-1.7.8 - 03 Feb 2021 05:15:14 UTC

Bio::Root::Root - implementation of Bio::Root::RootI interface River stage two • 60 direct dependents • 65 total dependents

This is a hashref-based implementation of the Bio::Root::RootI interface. Most Bioperl objects should inherit from this. See the documentation for Bio::Root::RootI for most of the methods implemented by this module. Only overridden methods are descri...

CJFIELDS/BioPerl-1.7.8 - 03 Feb 2021 05:15:14 UTC

Bio::SeqFeature::Collection - A container class for SeqFeatures suitable for performing operations such as finding features within a range, that match a certain feature type, etc. River stage two • 60 direct dependents • 65 total dependents

This object will efficiently allow one for query subsets of ranges within a large collection of sequence features (in fact the objects just have to be Bio::RangeI compliant). This is done by the creation of bins which are stored in order in a B-Tree ...

CJFIELDS/BioPerl-1.7.8 - 03 Feb 2021 05:15:14 UTC
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