Search results for "dist:BioPerl Bio::Tools::SeqStats"
Bio::Tools::SeqStats - Object holding statistics for one particular sequence
Bio::Tools::SeqStats is a lightweight object for the calculation of simple statistical and numerical properties of a sequence. By "lightweight" I mean that only "primary" sequences are handled by the object. The calling script needs to create the app...
CJFIELDS/BioPerl-1.7.8 - 03 Feb 2021 05:15:14 UTC
Bio::Tools::SeqWords - Object holding n-mer statistics for a sequence
Bio::Tools::SeqWords is a featherweight object for the calculation of n-mer word occurrences in a single sequence. It is envisaged that the object will be useful for construction of scripts which use n-mer word tables as the raw material for statisti...
CJFIELDS/BioPerl-1.7.8 - 03 Feb 2021 05:15:14 UTC
Bio::CodonUsage::Table - for access to the Codon usage Database at http://www.kazusa.or.jp/codon.
This class provides methods for accessing codon usage table data. All of the methods at present are simple look-ups of the table or are derived from simple calculations from the table. Future methods could include measuring the codon usage of a seque...
CJFIELDS/BioPerl-1.7.8 - 03 Feb 2021 05:15:14 UTC