Search for "dist:BioPerl-Run Bio::AlignIO::stockholm"

Search results for "dist:BioPerl-Run Bio::AlignIO::stockholm"

Bio::Tools::Run::Infernal - Wrapper for local execution of cmalign, cmbuild, cmsearch, cmscore

1 ++

Wrapper module for Sean Eddy's Infernal suite of programs. The current implementation runs cmsearch, cmcalibrate, cmalign, cmemit, cmbuild, cmscore, and cmstat. cmsearch will return a Bio::SearchIO, cmemit a Bio::SeqIO/AlignIO, and cmalign a Bio::Ali...

CJFIELDS /BioPerl-Run-1.007003 - 08 Feb 2019 19:55:33 UTC

Bio::Tools::Run::Phylo::Raxml

1 ++

Get a Bio::Tree object using raxml given a protein or DNA alignment....

CJFIELDS /BioPerl-Run-1.007003 - 08 Feb 2019 19:55:33 UTC

Bio::Tools::Run::Phylo::FastTree

1 ++

Get a Bio::Tree object given a protein or DNA alignment....

CJFIELDS /BioPerl-Run-1.007003 - 08 Feb 2019 19:55:33 UTC

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Search results for "dist:BioPerl-Run Bio::AlignIO::stockholm"

Bio::Tools::Run::Infernal - Wrapper for local execution of cmalign, cmbuild, cmsearch, cmscore River stage one • 2 direct dependents • 2 total dependents 1 ++ 1 ++

Bio::Tools::Run::Phylo::Raxml River stage one • 2 direct dependents • 2 total dependents 1 ++ 1 ++

Bio::Tools::Run::Phylo::FastTree River stage one • 2 direct dependents • 2 total dependents 1 ++ 1 ++

Bio::Tools::Run::Infernal - Wrapper for local execution of cmalign, cmbuild, cmsearch, cmscore

1 ++

Bio::Tools::Run::Phylo::Raxml

1 ++

Bio::Tools::Run::Phylo::FastTree

1 ++