Search for "dist:BioPerl-Run Bio::Matrix::Scoring"

Search results for "dist:BioPerl-Run Bio::Matrix::Scoring"

Bio::Tools::Run::Alignment::Lagan - Object for the local execution of the LAGAN suite of tools (including MLAGAN for multiple sequence alignments)

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To run mlagan/lagan, you must have an environment variable that points to the executable directory with files lagan.pl etc. "LAGAN_DIR=/opt/lagan_executables/" Simply having the executables in your path is not supported because the executables themse...

CJFIELDS /BioPerl-Run-1.007003 - 08 Feb 2019 19:55:33 UTC

Bio::Tools::Run::StandAloneBlast - Object for the local execution of the NCBI BLAST program suite (blastall, blastpgp, bl2seq). There is experimental support for WU-Blast and NCBI rpsblast.

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This DESCRIPTION only documents Bio::Tools::Run::StandAloneBlast, a Bioperl object for running the NCBI standAlone BLAST package. Blast itself is a large & complex program - for more information regarding BLAST, please see the BLAST documentation whi...

CJFIELDS /BioPerl-Run-1.007003 - 08 Feb 2019 19:55:33 UTC

Bio::Tools::Run::StandAloneNCBIBlast - Object for the local execution of the NCBI BLAST program suite (blastall, blastpgp, bl2seq). With experimental support for NCBI rpsblast.

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See Bio::Tools::Run::StandAloneBlast...

CJFIELDS /BioPerl-Run-1.007003 - 08 Feb 2019 19:55:33 UTC

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Search results for "dist:BioPerl-Run Bio::Matrix::Scoring"

Bio::Tools::Run::Alignment::Lagan - Object for the local execution of the LAGAN suite of tools (including MLAGAN for multiple sequence alignments) River stage one • 2 direct dependents • 2 total dependents 1 ++ 1 ++

Bio::Tools::Run::StandAloneBlast - Object for the local execution of the NCBI BLAST program suite (blastall, blastpgp, bl2seq). There is experimental support for WU-Blast and NCBI rpsblast. River stage one • 2 direct dependents • 2 total dependents 1 ++ 1 ++

Bio::Tools::Run::StandAloneNCBIBlast - Object for the local execution of the NCBI BLAST program suite (blastall, blastpgp, bl2seq). With experimental support for NCBI rpsblast. River stage one • 2 direct dependents • 2 total dependents 1 ++ 1 ++

Bio::Tools::Run::Alignment::Lagan - Object for the local execution of the LAGAN suite of tools (including MLAGAN for multiple sequence alignments)

1 ++

Bio::Tools::Run::StandAloneBlast - Object for the local execution of the NCBI BLAST program suite (blastall, blastpgp, bl2seq). There is experimental support for WU-Blast and NCBI rpsblast.

1 ++

Bio::Tools::Run::StandAloneNCBIBlast - Object for the local execution of the NCBI BLAST program suite (blastall, blastpgp, bl2seq). With experimental support for NCBI rpsblast.

1 ++