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Search results for "dist:BioPerl-Run HEIKKI"

Bio::Factory::EMBOSS - EMBOSS application factory class River stage one • 2 direct dependents • 2 total dependents

The EMBOSS factory class encapsulates access to EMBOSS programs. A factory object allows creation of only known applications. If you want to check command line options before sending them to the program set $prog->verbose to positive integer. The val...

CJFIELDS/BioPerl-Run-1.007003 - 08 Feb 2019 19:55:33 UTC

Bio::Tools::Run::EMBOSSacd - class for EMBOSS Application qualifiers River stage one • 2 direct dependents • 2 total dependents

The EMBOSSacd represents all the possible command line arguments that can be given to an EMBOSS application. Do not create this object directly. It will be created and attached to its corresponding Bio::Tools::Run::EMBOSSApplication if you set $appli...

CJFIELDS/BioPerl-Run-1.007003 - 08 Feb 2019 19:55:33 UTC

Bio::Tools::Run::Phylo::Phyml - Wrapper for rapid reconstruction of phylogenies using Phyml River stage one • 2 direct dependents • 2 total dependents

This is a wrapper for running the phyml application by Stephane Guindon and Olivier Gascuel. You can download it from: http://atgc.lirmm.fr/phyml/ Installing After downloading, you need to rename a the copy of the program that runs under your operati...

CJFIELDS/BioPerl-Run-1.007003 - 08 Feb 2019 19:55:33 UTC

Bio::Tools::Run::EMBOSSApplication - class for EMBOSS Applications River stage one • 2 direct dependents • 2 total dependents

The EMBOSSApplication class can represent any EMBOSS program. It is created by a Bio::Factory::EMBOSS object. If you want to check command line options before sending them to the program set $prog->verbose to positive integer. The ADC description of ...

CJFIELDS/BioPerl-Run-1.007003 - 08 Feb 2019 19:55:33 UTC
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