Search results for "dist:FAST Bio::Factory::ObjectFactory"
FAST::Bio::Factory::ObjectFactory - Instantiates a new FAST::Bio::Root::RootI (or derived class) through a factory
This object will build FAST::Bio::Root::RootI objects generically....
DHARD/FAST-1.06 - 21 Apr 2015 08:04:25 UTC
FAST::Bio::Factory::ObjectFactoryI - A General object creator factory
This interface is the basic structure for a factory which creates new objects. In this case it is up to the implementer to check arguments and initialize whatever new object the implementing class is designed for....
DHARD/FAST-1.06 - 21 Apr 2015 08:04:25 UTC
FAST::Bio::Factory::ObjectBuilderI - Interface for an object builder
An object builder is different from an object factory in that it accumulates information for the object and finally, or constantly, depending on the implementation, builds the object. It also allows for implementations that can tell the information f...
DHARD/FAST-1.06 - 21 Apr 2015 08:04:25 UTC
FAST::Bio::SeqFeature::FeaturePair - hold pair feature information e.g. blast hits
A sequence feature object where the feature is itself a feature on another sequence - e.g. a blast hit where residues 1-40 of a protein sequence SW:HBA_HUMAN has hit to bases 100 - 220 on a genomic sequence HS120G22. The genomic sequence coordinates ...
DHARD/FAST-1.06 - 21 Apr 2015 08:04:25 UTC
FAST::Bio::Ontology::OntologyEngineI - Interface a minimal Ontology implementation should satisfy
This describes the minimal interface an ontology query engine should provide. It intentionally does not make explicit references to the ontology being a DAG, nor does it mandate that the ontology be a vocabulary. Rather, it tries to generically expre...
DHARD/FAST-1.06 - 21 Apr 2015 08:04:25 UTC
FAST::Bio::OntologyIO::Handlers::InterProHandler - XML handler class for InterProParser
Handles xml events generated by InterProParser when parsing InterPro XML files....
DHARD/FAST-1.06 - 21 Apr 2015 08:04:25 UTC