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Search results for "distribution:Bio-Chado-Schema Bio::Phenotype::Phenotype"

Bio::Chado::Schema::Result::Phenotype::Phenotype River stage one • 3 direct dependents • 3 total dependents
4 ++

A phenotypic statement, or a single atomic phenotypic observation, is a controlled sentence describing observable effects of non-wild type function. E.g. Obs=eye, attribute=color, cvalue=red....

RBUELS/Bio-Chado-Schema-0.20000 - 06 Jul 2012 19:06:31 UTC

Bio::Chado::Schema::Result::Phenotype - Entity-attribute-value phenotypic character descriptions River stage one • 3 direct dependents • 3 total dependents
4 ++

RBUELS/Bio-Chado-Schema-0.20000 - 06 Jul 2012 19:06:31 UTC

Bio::Chado::Schema::Result::Phenotype::Phenotypeprop River stage one • 3 direct dependents • 3 total dependents
4 ++

A phenotype can have any number of slot-value property tags attached to it. This is an alternative to hardcoding a list of columns in the relational schema, and is completely extensible. There is a unique constraint, phenotypeprop_c1, for the combina...

RBUELS/Bio-Chado-Schema-0.20000 - 06 Jul 2012 19:06:31 UTC

Bio::Chado::Schema::Result::Phenotype::PhenotypeCvterm River stage one • 3 direct dependents • 3 total dependents
4 ++

RBUELS/Bio-Chado-Schema-0.20000 - 06 Jul 2012 19:06:31 UTC

Bio::Chado::Schema::Result::Phenotype::FeaturePhenotype River stage one • 3 direct dependents • 3 total dependents
4 ++

RBUELS/Bio-Chado-Schema-0.20000 - 06 Jul 2012 19:06:31 UTC

Bio::Chado::Schema::Result::Genetic::PhenotypeComparison River stage one • 3 direct dependents • 3 total dependents
4 ++

Comparison of phenotypes e.g., genotype1/environment1/phenotype1 "non-suppressible" with respect to genotype2/environment2/phenotype2....

RBUELS/Bio-Chado-Schema-0.20000 - 06 Jul 2012 19:06:31 UTC

Bio::Chado::Schema::Result::Genetic::PhenotypeComparisonCvterm River stage one • 3 direct dependents • 3 total dependents
4 ++

RBUELS/Bio-Chado-Schema-0.20000 - 06 Jul 2012 19:06:31 UTC

Bio::Chado::Schema::Result::NaturalDiversity::NdExperimentPhenotype River stage one • 3 direct dependents • 3 total dependents
4 ++

Linking table: experiments to the phenotypes they produce. There is a one-to-one relationship between an experiment and a phenotype since each phenotype record should point to one experiment. Add a new experiment_id for each phenotype record....

RBUELS/Bio-Chado-Schema-0.20000 - 06 Jul 2012 19:06:31 UTC

Bio::Chado::Schema::Result::Genetic::Environment - The environmental component of a phenotype description. River stage one • 3 direct dependents • 3 total dependents
4 ++

RBUELS/Bio-Chado-Schema-0.20000 - 06 Jul 2012 19:06:31 UTC

Bio::Chado::Schema - A standard DBIx::Class layer for the Chado database schema. River stage one • 3 direct dependents • 3 total dependents
4 ++

This is a standard object-relational mapping layer for use with the GMOD Chado database schema. This layer is implemented with DBIx::Class, generated with the help of the very fine DBIx::Class::Schema::Loader module. Chado is an open-source modular d...

RBUELS/Bio-Chado-Schema-0.20000 - 06 Jul 2012 19:06:31 UTC

Bio::Chado::NaturalDiversity::Reports River stage one • 3 direct dependents • 3 total dependents
4 ++

A collection of functions for formatting Chado stock related data in different data structures which can be useful for passing to different programs and software. Because the Chado stock table is the key for storing samples subjected to genotyping an...

RBUELS/Bio-Chado-Schema-0.20000 - 06 Jul 2012 19:06:31 UTC

Bio::Chado::Schema::Result::Cv::Cvterm River stage one • 3 direct dependents • 3 total dependents
4 ++

A term, class, universal or type within an ontology or controlled vocabulary. This table is also used for relations and properties. cvterms constitute nodes in the graph defined by the collection of cvterms and cvterm_relationships....

RBUELS/Bio-Chado-Schema-0.20000 - 06 Jul 2012 19:06:31 UTC

Bio::Chado::Schema::Result::Stock::Stock River stage one • 3 direct dependents • 3 total dependents
4 ++

Any stock can be globally identified by the combination of organism, uniquename and stock type. A stock is the physical entities, either living or preserved, held by collections. Stocks belong to a collection; they have IDs, type, organism, descripti...

RBUELS/Bio-Chado-Schema-0.20000 - 06 Jul 2012 19:06:31 UTC

Bio::Chado::Schema::Result::Sequence::Feature River stage one • 3 direct dependents • 3 total dependents
4 ++

A feature is a biological sequence or a section of a biological sequence, or a collection of such sections. Examples include genes, exons, transcripts, regulatory regions, polypeptides, protein domains, chromosome sequences, sequence variations, cros...

RBUELS/Bio-Chado-Schema-0.20000 - 06 Jul 2012 19:06:31 UTC

Bio::Chado::Schema::Result::Genetic::Phenstatement River stage one • 3 direct dependents • 3 total dependents
4 ++

Phenotypes are things like "larval lethal". Phenstatements are things like "dpp-1 is recessive larval lethal". So essentially phenstatement is a linking table expressing the relationship between genotype, environment, and phenotype....

RBUELS/Bio-Chado-Schema-0.20000 - 06 Jul 2012 19:06:31 UTC
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