Search results for "distribution:BioPerl Bio::Matrix::PhylipDist"
Bio::Matrix::PhylipDist - A Phylip Distance Matrix object
Simple object for holding Distance Matrices generated by the following Phylip programs: 1) dnadist 2) protdist 3) restdist It currently handles parsing of the matrix without the data output option. 5 Alpha 0.00000 4.23419 3.63330 6.20865 3.45431 Beta...
CJFIELDS/BioPerl-1.7.8 - 03 Feb 2021 05:15:14 UTC
Bio::Matrix::IO::phylip - A parser for PHYLIP distance matricies
This is a parser for PHYLIP distance matrix output....
CJFIELDS/BioPerl-1.7.8 - 03 Feb 2021 05:15:14 UTC
Bio::Align::DNAStatistics - Calculate some statistics for a DNA alignment
This object contains routines for calculating various statistics and distances for DNA alignments. The routines are not well tested and do contain errors at this point. Work is underway to correct them, but do not expect this code to give you the rig...
CJFIELDS/BioPerl-1.7.8 - 03 Feb 2021 05:15:14 UTC
Bio::Align::ProteinStatistics - Calculate Protein Alignment statistics (mostly distances)
This object is for generating various statistics from a protein alignment. Mostly it is where pairwise protein distances can be calculated....
CJFIELDS/BioPerl-1.7.8 - 03 Feb 2021 05:15:14 UTC
Bio::Tools::Phylo::Phylip::ProtDist - parser for ProtDist output
A parser for ProtDist output into a Bio::Matrix::PhylipDist object. See also Bio::Matrix::IO::phylip this module may go away....
CJFIELDS/BioPerl-1.7.8 - 03 Feb 2021 05:15:14 UTC