Search results for "distribution:BioPerl-DB Bio::Annotation::Reference"
Bio::DB::Query::BioQuery - Object representing a query on a bioperldb
A BioQuery is a high level query on a biological database. It allows queries to be specified regardless of the underlying schema. Although a BioQuery can be translated into a corresponding SQL query or series of SQL queries, it is not always desirabl...
CJFIELDS/BioPerl-DB-1.006900 - 15 Apr 2011 19:35:57 UTC
Bio::DB::BioSQL::SeqAdaptor - DESCRIPTION of Object
Describe the object here...
CJFIELDS/BioPerl-DB-1.006900 - 15 Apr 2011 19:35:57 UTC
Bio::DB::BioSQL::TermAdaptor - DESCRIPTION of Object
Term DB adaptor...
CJFIELDS/BioPerl-DB-1.006900 - 15 Apr 2011 19:35:57 UTC
Bio::DB::Query::DBQueryResult - DESCRIPTION of Object
This modules provides an implementation of Bio::DB::Query::QueryResultI for database queries through DBI....
CJFIELDS/BioPerl-DB-1.006900 - 15 Apr 2011 19:35:57 UTC
Bio::DB::BioSQL::DBLinkAdaptor - DBLink Adaptor
Adaptor for DBLinks...
CJFIELDS/BioPerl-DB-1.006900 - 15 Apr 2011 19:35:57 UTC
Bio::DB::BioSQL::ClusterAdaptor - DESCRIPTION of Object
Describe the object here...
CJFIELDS/BioPerl-DB-1.006900 - 15 Apr 2011 19:35:57 UTC
Bio::DB::BioSQL::CommentAdaptor - DESCRIPTION of Object
Adaptor for Comment objects inside bioperl db...
CJFIELDS/BioPerl-DB-1.006900 - 15 Apr 2011 19:35:57 UTC
Bio::DB::BioSQL::LocationAdaptor - DESCRIPTION of Object
Describe the object here...
CJFIELDS/BioPerl-DB-1.006900 - 15 Apr 2011 19:35:57 UTC
Bio::DB::BioSQL::ReferenceAdaptor - DESCRIPTION of Object
Adaptor for Reference objects inside bioperl db...
CJFIELDS/BioPerl-DB-1.006900 - 15 Apr 2011 19:35:57 UTC
Bio::DB::BioSQL::SeqFeatureAdaptor - DESCRIPTION of Object
Describe the object here...
CJFIELDS/BioPerl-DB-1.006900 - 15 Apr 2011 19:35:57 UTC
Bio::DB::BioSQL::PrimarySeqAdaptor - DESCRIPTION of Object
Describe the object here...
CJFIELDS/BioPerl-DB-1.006900 - 15 Apr 2011 19:35:57 UTC
Bio::DB::BioSQL::SimpleValueAdaptor - DESCRIPTION of Object
SimpleValue DB adaptor...
CJFIELDS/BioPerl-DB-1.006900 - 15 Apr 2011 19:35:57 UTC
load_ontology.pl
This script loads a BioSQL database with an ontology. There are a number of options to do with where the BioSQL database is (ie, hostname, user for database, password, database name) followed by the database name you wish to load this into and then a...
CJFIELDS/BioPerl-DB-1.006900 - 15 Apr 2011 19:35:57 UTC
Bio::DB::BioSQL::BasePersistenceAdaptor - DESCRIPTION of Object
Describe the object here...
CJFIELDS/BioPerl-DB-1.006900 - 15 Apr 2011 19:35:57 UTC
load_seqdatabase.pl
This script loads a BioSQL database with sequences. There are a number of options that have to do with where the database is and how it's accessed and the format and namespace of the input files. These are followed by any number of file names. The fi...
CJFIELDS/BioPerl-DB-1.006900 - 15 Apr 2011 19:35:57 UTC
Bio::DB::BioSQL::AnnotationCollectionAdaptor - DESCRIPTION of Object
Describe the object here...
CJFIELDS/BioPerl-DB-1.006900 - 15 Apr 2011 19:35:57 UTC