Bio::AlignIO::mase - mase sequence input/output stream

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This object can transform Bio::Align::AlignI objects to and from mase flat file databases....

CJFIELDS/BioPerl-1.7.8 - 03 Feb 2021 05:15:14 UTC - Search in distribution

• Bio::AlignIO - Handler for AlignIO Formats

FAST::Bio::AlignIO::mase - mase sequence input/output stream

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This object can transform FAST::Bio::Align::AlignI objects to and from mase flat file databases....

DHARD/FAST-1.06 - 21 Apr 2015 08:04:25 UTC - Search in distribution

• FAST::Bio::AlignIO - Handler for AlignIO Formats

Tutorial - Hands-on tutorial for using Bio::NEXUS module.

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Tutorial to get started using Bio::NEXUS module. INTRODUCTION The NEXUS file format standard of Maddison, et al. (1997) is designed to represent sets of data, including character data (e.g., molecular sequence alignments, morphological character sets...

ARLIN/Bio-NEXUS-0.78 - 10 Feb 2012 13:31:13 UTC - Search in distribution

aln2aln - convert different alignment formats to another alignment format

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Takes <input_alignment_file> and converts it to <file_in_other_format> On default, it assumes 'fasta' as input format, but you can use the --from option to make sure that aln2aln uses a different format. Same applies to --to Some formats have a limit...

JWB/Bio-Gonzales-0.083 - 02 Jan 2021 23:10:48 UTC - Search in distribution