Search results for "Bio::AnnotationCollectionI"
Bio::AnnotationCollectionI - Interface for annotation collections
Annotation Collections are a way of storing a series of "interesting facts" about something. We call an "interesting fact" in Bioperl an Annotation (this differs from a Sequence Feature, which is called a Sequence Feature and may or may not have an A...
CJFIELDS/BioPerl-1.7.8 - 03 Feb 2021 05:15:14 UTC - Search in distribution- Bio::Annotation::Collection - Default Perl implementation of AnnotationCollectionI
- Bio::Seq - Sequence object, with features
- Bio::SeqI - [Developers] Abstract Interface of Sequence (with features)
- 13 more results from BioPerl »
FAST::Bio::AnnotationCollectionI - Interface for annotation collections
Annotation Collections are a way of storing a series of "interesting facts" about something. We call an "interesting fact" in Bioperl an Annotation (this differs from a Sequence Feature, which is called a Sequence Feature and may or may not have an A...
DHARD/FAST-1.06 - 21 Apr 2015 08:04:25 UTC - Search in distribution- FAST::Bio::Seq - Sequence object, with features
- FAST::Bio::AnnotationI - Annotation interface
- FAST::Bio::SeqI - [Developers] Abstract Interface of Sequence (with features)
- 9 more results from FAST »
Bio::Cluster::UniGene - UniGene object
This UniGene object implements the Bio::Cluster::UniGeneI interface for the representation if UniGene clusters in Bioperl. It is returned by the Bio::ClusterIO parser for unigene format and contains all the data associated with one UniGene record. Th...
CJFIELDS/Bio-Cluster-1.7.3 - 01 Oct 2018 04:35:53 UTC - Search in distribution
Bio::DB::BioSQL::SeqFeatureAdaptor - DESCRIPTION of Object
Describe the object here...
CJFIELDS/BioPerl-DB-1.006900 - 15 Apr 2011 19:35:57 UTC - Search in distribution- Bio::DB::BioSQL::AnnotationCollectionAdaptor - DESCRIPTION of Object
Bio::Network::Interaction - describes a protein-protein interaction
This class contains information about a bi-molecular interaction. At present it just contains data about a weight (optional) and an identifier. Subclasses could hold more specific information. A pair of nodes can have more than one Interaction object...
CJFIELDS/BioPerl-Network-1.006902 - 07 Nov 2011 16:27:40 UTC - Search in distribution
Bio::SeqFeature::Annotated - PLEASE PUT SOMETHING HERE
None yet, complain to authors....
CJFIELDS/Bio-FeatureIO-1.6.905 - 05 Sep 2014 17:34:58 UTC - Search in distribution
Bio::Graphics::ConfiguratorI - A sectioned map of configuration options (a map of maps), with a default section. Intended to augment existing tag-gtvalue semantics (ie. of Bio::AnnotationCollectionI) for object-representation information (eg. foreground color), and for general interface preferences (eg. image width in gbrowse).
This object contains various configuration parameters. It is divided up into sections and tags. This is essentially a multi-level map (section->tag->value). There is also the concept of a default section which is referenced when no section is passed ...
CJFIELDS/Bio-Graphics-2.40 - 16 Dec 2016 04:50:36 UTC - Search in distribution