Search results for "Bio::DB::DBI::mysql"
Bio::DB::DBI::mysql - DESCRIPTION of Object
Describe the object here...
CJFIELDS/BioPerl-DB-1.006900 - 15 Apr 2011 19:35:57 UTC - Search in distribution
Bio::DB::GFF::Adaptor::dbi::mysql - Database adaptor for a specific mysql schema
This adaptor implements a specific mysql database schema that is compatible with Bio::DB::GFF. It inherits from Bio::DB::GFF::Adaptor::dbi, which itself inherits from Bio::DB::GFF. The schema uses several tables: fdata This is the feature data table....
CJFIELDS/Bio-DB-GFF-1.7.4 - 08 Jan 2020 20:41:58 UTC - Search in distribution- Bio::DB::GFF - Storage and retrieval of sequence annotation data
- bp_meta_gff.pl - Get/set Bio::DB::GFF meta-data
- bp_load_gff.pl - Load a Bio::DB::GFF database from GFF files.
- 13 more results from Bio-DB-GFF »
Bio::DB::SeqFeature::Store::DBI::mysql - Mysql implementation of Bio::DB::SeqFeature::Store
Bio::DB::SeqFeature::Store::mysql is the Mysql adaptor for Bio::DB::SeqFeature::Store. You will not create it directly, but instead use Bio::DB::SeqFeature::Store->new() to do so. See Bio::DB::SeqFeature::Store for complete usage instructions. Using ...
CJFIELDS/Bio-DB-SeqFeature-1.7.4 - 09 Jan 2020 04:03:49 UTC - Search in distribution- bp_seqfeature_load.pl - Load GFF into a SeqFeature database
- Bio::DB::SeqFeature - Normalized feature for use with Bio::DB::SeqFeature::Store
- Bio::DB::SeqFeature::Store - Storage and retrieval of sequence annotation data
- 12 more results from Bio-DB-SeqFeature »
GO::AppHandle - Gene Ontology Data API handle
This is a module for accessing Gene Ontology data sources, e.g the GO relational database. It defines a set of methods that provide a consistent interface independent of the way the GO data is stored. For an explanation of the GO project, please visi...
SJCARBON/go-db-perl-0.04 - 21 Dec 2009 21:56:44 UTC - Search in distribution
Audio::DB - Tools for generating relational databases of music files
Audio::DB is a series of modules for creating relational databases of music files directly from data stored in ID3 tags or from flatfiles of information of track information. Once created, Audio::DB provides various methods for creating reports and w...
TWH/Audio-DB-0.01 - 27 Feb 2005 17:04:31 UTC - Search in distribution- Audio::DB::Build - Tools for generating relational databases of MP3s
- Audio::DB::Adaptor::dbi::mysql - Database adaptor for a specific mysql schema
- Audio::DB::Adaptor::dbi::sqlite - Database adaptor for a specific mysql schema
pod::INSTALL
LDS/GBrowse-2.56
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15 Jan 2017 21:29:11 UTC
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- pod::CONFIGURE_HOWTO
- pod::GENBANK_HOWTO
- bp_load_gff.pl - Load a Bio::DB::GFF database from GFF files.
- 5 more results from GBrowse »
Bundle::BioPerl - A bundle to install external CPAN modules used by BioPerl 1.5.2
The BioPerl distribution from http://bioperl.org contains code and modules that may use or require additional 'external' perl modules for advanced functionality. Many of the external modules are not contained within the standard Perl distribution. Th...
CJFIELDS/Bundle-BioPerl-2.1.9 - 16 Jan 2015 20:05:40 UTC - Search in distribution
Bio::DB::Das::Chado - DAS-style access to a chado database
Bio::DB::Das::Chado allows DAS style access to a Chado database, getting SeqFeatureI-compliant BioPerl objects and allowing GBrowse to access a Chado database directly....
SCAIN/Bio-DB-Das-Chado-0.35a - 07 Apr 2015 23:02:17 UTC - Search in distribution
Bio::ToolBox::db_helper::config
This module accesses the biotoolbox configuration file. This file stores multiple database connection settings. It also stores the paths to various helper applications. The default location for the file is in the user's home directory. Alternatively,...
TJPARNELL/Bio-ToolBox-1.691 - 13 Oct 2022 18:07:52 UTC - Search in distribution
Bio::MAGETAB::Util::Persistence - A Tangram-based object persistence class for MAGE-TAB.
This class provides an object persistence mechanism for storing MAGE-TAB objects in a relational database. The class is, in effect, just a thin wrapper around a Tangram::Storage instance which implements most of the database interaction methods. The ...
TFRAYNER/Bio-MAGETAB-1.31 - 11 Apr 2014 15:00:10 UTC - Search in distribution
Bio::DB::GFF::Adaptor::ace - ace interface (for multiple inheritance)
CJFIELDS/Bio-DB-Ace-1.7.3
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25 Sep 2018 00:11:27 UTC
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- Bio::DB::GFF::Adaptor::dbi::mysqlace - Unholy union between mysql GFF database and acedb database
Data::Printer::Filter::DB - pretty-printing database objects (DBI, DBIx::Class, etc)
This is a filter plugin for Data::Printer that displays (hopefully) more relevant information on database objects than a regular dump. Parsed Modules DBI If it's a database handle, for example, this filter may show you something like this: SQLite Dat...
GARU/Data-Printer-1.002001 - 22 Jan 2024 03:32:20 UTC - Search in distribution
Bio::Das::ProServer::SourceHydra::dbi - A database-backed implementation of B::D::P::SourceHydra
RPETTETT/Bio-Das-ProServer-2.20
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02 Nov 2010 11:59:40 UTC
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HTTP::AppServer::Plugin::Database - Plugin for HTTP::AppServer that allows easy DBI database access.
Plugin for HTTP::AppServer that provides a connection to a DBI database handle (relational database). On top of that it provides simplified calling of common database queries, such as select, update, delete etc. Plugin configuration DBEngine => *name...
KITOMER/HTTP-AppServer-0.04 - 15 Dec 2010 08:55:37 UTC - Search in distribution