Bio::DB::GFF::Adaptor::dbi::oracle - Database adaptor for a specific oracle schema

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This adaptor implements a specific oracle database schema that is compatible with Bio::DB::GFF. It inherits from Bio::DB::GFF::Adaptor::dbi, which itself inherits from Bio::DB::GFF. The schema uses several tables: fdata This is the feature data table...

CJFIELDS/Bio-DB-GFF-1.7.4 - 08 Jan 2020 20:41:58 UTC - Search in distribution

• Bio::DB::GFF::Adaptor::biofetch - Cache BioFetch objects in a Bio::DB::GFF database
• bp_load_gff.pl - Load a Bio::DB::GFF database from GFF files.
• bp_genbank2gff.pl - Load a Bio::DB::GFF database from GENBANK files.
• 2 more results from Bio-DB-GFF »

bp_load_gff.pl - Load a Bio::DB::GFF database from GFF files.

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This script loads a Bio::DB::GFF database with the features contained in a list of GFF files and/or FASTA sequence files. You must use the exact variant of GFF described in Bio::DB::GFF. Various command-line options allow you to control which databas...

LDS/GBrowse-2.56 - 15 Jan 2017 21:29:11 UTC - Search in distribution

• pod::CONFIGURE_HOWTO
• pod::GENBANK_HOWTO
• pod::ORACLE_AND_POSTGRESQL

Bio::DB::GFF::Adaptor::dbi::oracleace - Unholy union between oracle GFF database and acedb database

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CJFIELDS/Bio-DB-Ace-1.7.3 - 25 Sep 2018 00:11:27 UTC - Search in distribution