Search results for "Bio::DB::Taxonomy::list"
Bio::DB::Taxonomy::list - An implementation of Bio::DB::Taxonomy that accepts lists of words to build a database
This is an implementation which uses supplied lists of words to create a database from which you can extract Bio::Taxon objects....
CJFIELDS/BioPerl-1.7.8 - 03 Feb 2021 05:15:14 UTC - Search in distribution- Bio::Taxon - A node in a represented taxonomy
- Bio::DB::Taxonomy - Access to a taxonomy database
- Bio::DB::Taxonomy::silva - Use the Silva taxonomy
- 3 more results from BioPerl »
FAST::Bio::DB::Taxonomy::list - An implementation of FAST::Bio::DB::Taxonomy that accepts lists of words to build a database
This is an implementation which uses supplied lists of words to create a database from which you can extract FAST::Bio::Taxon objects....
DHARD/FAST-1.06 - 21 Apr 2015 08:04:25 UTC - Search in distribution- FAST::Bio::Taxon - A node in a represented taxonomy
- FAST::Bio::DB::Taxonomy - Access to a taxonomy database
- FAST::Bio::DB::Taxonomy::entrez - Taxonomy Entrez driver
- 1 more result from FAST »
Bio::DB::Taxonomy::sqlite - SQLite-based implementation of Bio::DB::Taxonomy::flatfile
This is an implementation of Bio::DB::Taxonomy which stores and accesses the NCBI taxonomy using a simple SQLite3 database stored locally on disk. With this implementation, one can do the same basic searches as with the 'flatfile' database. A test lo...
CJFIELDS/Bio-DB-Taxonomy-sqlite-1.7.3 - 02 Mar 2020 05:53:54 UTC - Search in distribution
Bio::DB::Taxonomy::entrez - Taxonomy Entrez driver
A driver for querying NCBI Entrez Taxonomy database....
CJFIELDS/Bio-DB-NCBIHelper-1.7.8 - 15 Dec 2023 04:25:18 UTC - Search in distribution
Bio::DB::TFBS - Access to a Transcription Factor Binding Site database
This is a front end module for access to a Transcription Factor Binding Site database....
CJFIELDS/Bio-DB-TFBS-1.7.3 - 25 Sep 2018 00:20:12 UTC - Search in distribution- Bio::DB::TFBS::transfac_pro - An implementation of Bio::DB::TFBS which uses local flat files for transfac pro
Physeter::Manual - User Guide for Physeter
DBAURAIN/Bio-MUST-Apps-Physeter-0.213470
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13 Dec 2021 11:04:21 UTC
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Bio::Community::IO - Read and write files that describe communities
A Bio::Community::IO object implement methods to read and write communities in formats used by popular programs such as BIOM, GAAS, QIIME, Unifrac, or as generic tab-separated tables. The format should be automatically detected though it can be manua...
FANGLY/Bio-Community-0.001008 - 08 Jan 2016 20:06:45 UTC - Search in distribution
Bio::DB::Biblio::eutils - access to PubMed's bibliographic query service
CDRAUG/Bio-Biblio-1.70
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24 Mar 2013 00:19:52 UTC
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Bio::DB::SoapEUtilities - Interface to the NCBI Entrez web service *BETA*
This module allows the user to query the NCBI Entrez database via its SOAP (Simple Object Access Protocol) web service (described at <http://eutils.ncbi.nlm.nih.gov/entrez/eutils/soap/v2.0/DOC/esoap_help.h tml>). The basic tools ("einfo, esearch, eli...
CJFIELDS/BioPerl-Run-1.007003 - 08 Feb 2019 19:55:33 UTC - Search in distribution- Bio::Tools::Run::Phylo::Semphy - Wrapper for Semphy
- Bio::Tools::Run::Phylo::Phast::PhyloFit - Wrapper for phyloFit
- Bio::Tools::Run::Phylo::Phast::PhastCons - Wrapper for footprinting using phastCons
- 3 more results from BioPerl-Run »