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Search results for "Bio::Graph::SimpleGraph"

Bio::ConnectDots::SimpleGraph River stage zero No dependents

This is a simple, hopefully fast undirected graph package. The only reason this exists is that the standard CPAN Graph pacakge, Graph::Base, is seriously broken. The package implements a small and eclectic assortment of standard graph algorithms that...

DBURDICK/Bio-ConnectDots-1.0.2 - 07 Apr 2005 22:06:44 UTC - Search in distribution

Bio::Ontology::SimpleGOEngine::GraphAdaptor - Graph adaptor for Bio::Ontology::SimpleGOEngine River stage two • 60 direct dependents • 65 total dependents

This is an adaptor to simplify use of versions of the standard CPAN Graph module (old is versions 0.2x; new is 0.5x and beyond) within Bio::Ontology::SimpleGOEngine. Prior versions of this module supported Graph version older than 0.5, however we are...

CJFIELDS/BioPerl-1.7.8 - 03 Feb 2021 05:15:14 UTC - Search in distribution

FAST::Bio::Ontology::SimpleGOEngine::GraphAdaptor - Graph adaptor for FAST::Bio::Ontology::SimpleGOEngine River stage zero No dependents

This is a think adaptor to simplify use of the old and new versions of the standard CPAN Graph module (old is versions 0.2x; new is 0.5x and beyond) within FAST::Bio::Ontology::SimpleGOEngine. This module implements only those Graph methods used by S...

DHARD/FAST-1.06 - 21 Apr 2015 08:04:25 UTC - Search in distribution

Bio::Network::ProteinNet - a representation of a protein interaction graph. River stage zero No dependents

A ProteinNet is a representation of a protein interaction network. Its functionality comes from the Graph module of Perl and from BioPerl, the nodes or vertices in the network are Sequence objects. Nodes A node is one or more BioPerl sequence objects...

CJFIELDS/BioPerl-Network-1.006902 - 07 Nov 2011 16:27:40 UTC - Search in distribution
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