Search results for "Bio::Matrix::PSM::ProtMatrix"
Bio::Matrix::PSM::ProtMatrix - SiteMatrixI implementation, holds a position scoring matrix (or position weight matrix) with log-odds scoring information.
ProtMatrix is designed to provide some basic methods when working with position scoring (weight) matrices related to protein sequences. A protein PSM consists of 20 vectors with 20 frequencies (one per amino acid per position). This is the minimum in...
CJFIELDS/BioPerl-1.7.8 - 03 Feb 2021 05:15:14 UTC - Search in distribution- Bio::Matrix::PSM::ProtPsm - handle combination of site matricies
- Bio::Matrix::PSM::IO::psiblast - PSM psiblast parser