Search results for "Bio::OntologyIO"
Bio::OntologyIO - Parser factory for Ontology formats
This is the parser factory for different ontology sources and formats. Conceptually, it is very similar to Bio::SeqIO, but the difference is that the chunk of data returned as an object is an entire ontology....
CJFIELDS/BioPerl-1.7.8 - 03 Feb 2021 05:15:14 UTC - Search in distribution- Bio::OntologyIO::obo - parser for OBO flat-file format
- Bio::OntologyIO::goflat - a parser for the Gene Ontology flat-file format
- Bio::OntologyIO::soflat - a parser for the Sequence Ontology flat-file format
- 9 more results from BioPerl »
FAST::Bio::OntologyIO - Parser factory for Ontology formats
This is the parser factory for different ontology sources and formats. Conceptually, it is very similar to FAST::Bio::SeqIO, but the difference is that the chunk of data returned as an object is an entire ontology....
DHARD/FAST-1.06 - 21 Apr 2015 08:04:25 UTC - Search in distribution- FAST::Bio::OntologyIO::obo - a parser for OBO flat-file format from Gene Ontology Consortium
- FAST::Bio::OntologyIO::soflat - a parser for the Sequence Ontology flat-file format
- FAST::Bio::OntologyIO::goflat - a parser for the Gene Ontology flat-file format
- 9 more results from FAST »
load_ontology.pl
This script loads a BioSQL database with an ontology. There are a number of options to do with where the BioSQL database is (ie, hostname, user for database, password, database name) followed by the database name you wish to load this into and then a...
CJFIELDS/BioPerl-DB-1.006900 - 15 Apr 2011 19:35:57 UTC - Search in distribution