Search results for "Bio::Search::Result::ResultI"
Bio::Search::Result::ResultI - Abstract interface to Search Result objects
Bio::Search::Result::ResultI objects are data structures containing the results from the execution of a search algorithm. As such, it may contain various algorithm specific information as well as details of the execution, but will contain a few funda...
CJFIELDS/BioPerl-1.7.8 - 03 Feb 2021 05:15:14 UTC - Search in distribution- Bio::Search::Result::PullResultI - Bio::Search::Result::ResultI interface for 'pull' parsers
- Bio::Search::Result::ResultFactory - A factory to create Bio::Search::Result::ResultI objects
- Bio::Search::Result::GenericResult - Generic Implementation of Bio::Search::Result::ResultI interface applicable to most search results.
- 34 more results from BioPerl »
FAST::Bio::Search::Result::ResultI - Abstract interface to Search Result objects
FAST::Bio::Search::Result::ResultI objects are data structures containing the results from the execution of a search algorithm. As such, it may contain various algorithm specific information as well as details of the execution, but will contain a few...
DHARD/FAST-1.06 - 21 Apr 2015 08:04:25 UTC - Search in distribution- FAST::Bio::Search::Result::PullResultI - FAST::Bio::Search::Result::ResultI interface for 'pull' parsers
- FAST::Bio::Search::Result::ResultFactory - A factory to create FAST::Bio::Search::Result::ResultI objects
- FAST::Bio::SearchIO - Driver for parsing Sequence Database Searches (BLAST, FASTA, ...)
- 39 more results from FAST »
Bio::SearchIO::blastxml - A SearchIO implementation of NCBI Blast XML parsing.
This object implements a NCBI Blast XML parser. It requires XML::SAX; it is also recommended (for faster parsing) that XML::SAX::ExpatXS or XML::LibXML be installed. Either 'XML::SAX::ExpatXS' or 'XML::LibXML::SAX::Parser' should be set as the defaul...
CJFIELDS/Bio-SearchIO-blastxml-1.70 - 04 Jan 2018 02:12:33 UTC - Search in distribution- Bio::SearchIO::XML::BlastHandler - XML Handler for NCBI Blast XML parsing.
- Bio::SearchIO::XML::PsiBlastHandler - XML Handler for NCBI Blast PSIBLAST XML parsing.
Bio::SearchIO::hmmer3
Code to parse output from hmmsearch, hmmscan, phmmer and nhmmer, compatible with both version 2 and version 3 of the HMMER package from <http://hmmer.org>....
CJFIELDS/Bio-SearchIO-hmmer-1.7.3 - 25 Sep 2018 00:26:52 UTC - Search in distribution- Bio::SearchIO::hmmer2 - A parser for HMMER output (hmmpfam, hmmsearch)
- Bio::SearchIO::hmmer_pull - A parser for HMMER output
- Bio::Search::Result::HMMERResult - A Result object for HMMER results